Automation script unable to pick settings in Chrome’s Switchyomega while automating website

I have to automate a website (eg in my company using selenium+java. To access the website manually, I have to configure settings in switchyomega (Google chrome extension). When I try to automate the website, I am able to see the URL in the URL bar but it is not able to pick the settings set in switchyomega.
How do I workaround this problem.

Thanks in Advance!